PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00513.1.g00100.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 255aa    MW: 27588 Da    PI: 7.0033
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00513.1.g00100.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.18e-1793142355
                           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr ++ +gr++AeIrd + +g  +r+++g+f+t+e Aa a+++a+ + +g
  Zpz_sc00513.1.g00100.1.sm.mk  93 FIGVRKRP-WGRFAAEIRDSTRRG--ARVWIGTFDTPEAAALAYDQAAFAARG 142
                                   78******.**********43343..**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.37792150IPR001471AP2/ERF domain
SMARTSM003804.9E-3092156IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-2093152IPR016177DNA-binding domain
CDDcd000181.28E-1193127No hitNo description
Gene3DG3DSA:3.30.730.102.3E-2793151IPR001471AP2/ERF domain
PRINTSPR003677.8E-893104IPR001471AP2/ERF domain
PfamPF008478.7E-1394142IPR001471AP2/ERF domain
PRINTSPR003677.8E-8116132IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MEQHLIQHPS HAAVAQHGSM PPPPFGTGDS VDMKMHLEAL MLFLEVEADE SSDSLSSSSS  60
RDSSLQAGTE SVTATACDAH QWQGSSTAVE KPFIGVRKRP WGRFAAEIRD STRRGARVWI  120
GTFDTPEAAA LAYDQAAFAA RGASAVLNFP VECVQESLRP LALPDAAGGG SPVLALKRRH  180
SKRTRRSKLS LSSNDLIRPQ RRKARRCSGE SSYSTPAVVA HALETPVCRC GVVELEDLGA  240
DYLEELLRVS SELQH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A5e-2391153466ATERF1
2gcc_A5e-2391153466ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199205QRRKARR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004959050.13e-52PREDICTED: ethylene-responsive transcription factor 1-like
SwissprotQ8VYM08e-42ERF93_ARATH; Ethylene-responsive transcription factor 15
TrEMBLK4A2J13e-52K4A2J1_SETIT; Uncharacterized protein
STRINGSi033089m9e-52(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06160.13e-27octadecanoid-responsive Arabidopsis AP2/ERF 59